Zhu CD, Huang DW. 2001a. Revision of Chinese Euplectromorpha Girault (Hymenoptera: Eulophidae) and two new species from outside of China. Insect Systematics and Evolution. 31:401-410 (SCI: 0.875)
Zhu CD, Huang DW. 2001b. A Study of Chinese Alophomorphella Girault (Hym. Eulophidae). Acta Zootaxonomica Sinica. 26(3):346-350.
Zhu CD, Huang DW. 2001c. A Study of Chinese Elachertus Spinola (Hymenoptera: Eulophidae). Zoological Studies. 40(4):317-354. (SCI: 0.86)
Zhu CD, Huang DW. 2001d. A taxonomical study of Eulophidae in Zhejiang, China. Acta Zootaxonomica Sinica. 26(4):533-547.
Zhu CD, Huang DW. 2002a. Platyplectrus medius, new species, and new records of Euplectrus from South Korea (Insecta: Hymenoptera: Eulophidae). The Raffles Bulletin of Zoology. 50(1):129-136. (SCI: 0.365)
Zhu CD, Huang DW. 2002b. Review of Chinese Species of Genus Eulophus Geoffroy and Comments on its relationships with other Genera in Eulophinae (Hymenoptera: Eulophidae). Entomological News. 113(1):50-63. (SCI: 0.32)
Zhu CD, Huang DW. 2002c. Two New Species and One New Record of Deutereulophus Schulz (Hymenoptera: Eulophidae) from South China. The Raffles Bulletin of Zoology. 50(2):353-358. (SCI: 0.365)
Zhu CD, Huang DW. 2002d. A study of Chinese Cirrospilus Westwood (Hymenoptera: Eulophidae). Zoological Studies. 41(1):23-46. (SCI: 0.86)
Zhu CD, Huang DW. 2002e. A taxonomic study on Eulophidae from Guangxi, China. Zootaxonomica Sinica. 27(3):583-607.
朱朝東、黃大衛. 2002. Eulophidae. in Insects of Tianmushan National Nature Reserve (Wu, H. & C.-W. Pan eds.), Science Press, Beijing. 701-706.
Zhu CD, Huang DW. 2003a. Chinese species of Genus Diglyphomorphomyia Girault (Hymenoptera: Eulophidae). Zoological Studies. 42(1): 444-449. (SCI: 0.86)
Zhu CD, Huang DW. 2003b. Preliminary Cladistics and Review of Hemiptarsenus Westwood and Sympiesis F?rster (Hymenoptera, Eulophidae) in Hungary. Zoological Studies. 42(2): 307-335. (SCI: 0.86)
Zhu CD, Huang DW. 2003c. A Study of the Genus Euplectrus Westwood (Hymenoptera: Eulophidae) in China. Zoological Studies. 42(1) : 140-164. (SCI: 0.86)
Zhu CD, Huang DW. 2004. A study of Platyplectrus Ferrière (Hymenoptera: Eulophidae) in mainland China. Journal of Natural History. 38(17): 2183-2209. (SCI: 0.695)
Gumovsky A, Polaszek A, Murphy A, Rabbi MF, Zhu CD. 2006. Closterocerus oryzamyntor (Hymenoptera: Eulophidae: Entedoninae), a larval parasitoid of the rice hispa Dicladispa armigera in Bangladesh (Coleoptera: Chrysomelidae: Hispinae). Zootaxa 1241: 51-59. (SCI: 0.891)
張彥周,朱朝東. 2007. 石井花翅跳小蜂(膜翅目:跳小蜂科)的雌雄通體個例. 昆蟲學報. 50(8): 868-870.
Niu ZQ, Zhu CD, Zhang YZ, Wu YR, Huang DW. 2007. A taxonomic study of the subgenus Vestitohalictus of the genus Halictus (Hymenoptera, Halictidae, Halictinae) from China. Acta Zootaxonomica Sinica. 32(1): 85-89.
牛澤清,朱朝東,張彥周,吳燕如,黃大衛.2007.隧蜂屬(膜翅目,隧蜂科)相關類元名稱的變動及隧蜂屬的分類研究現狀.動物分類學報:32(1):90-108.
黃海榮,張彥周,朱朝東*,吳燕如. 2007. 中國澳彩帶蜂亞屬研究(膜翅目,蜜蜂總科,隧蜂科). 動物分類學報.32(1):221-225.
Zhang YZ, Ding L, Huang HR, Zhu CD*. 2007. Eulophidae fauna (Hymenoptera, Chalcidoidea) from south Gansu and Qinling Mountains area, China. Acta Zootaxonomica Sinica. 32(1): 6-16.
黃海榮,朱朝東*,武三安,吳燕如.2008.中國齒足條蜂亞屬一新種記述(膜翅目,蜜蜂總科,蜜蜂科).動物分類學報:33(2).
張彥周*; 朱朝東. 2008. 四突跳小蜂亞科中國新紀錄屬、種(膜翅目,跳小蜂科)(英文). 動物分類學報: 33(3):640-641.
YUAN Feng , ZHAO Yan-Hui , ZHANG Yan-Zhou , ZHU Chao-Dong*. 2009. A gynandromorphy of Polistes nimphus (Christ, 1791) (Hymenoptera : Vespidae : Polistinae) in China. 昆蟲學報: 52(9): 1055-1057.
CD ZHU, ZHANG YZ. 2009. Pseudococcobius (Hymenoptera: Encyrtidae) from China, with a description of a new species. Oriental Insects 43:55-58. (SCI: 0.230)
XIAOLIN CHEN, YANZHOU ZHANG, JIE LI & CHAODONG ZHU*. 2010. A review of stalk-eyed fruit flies (Diptera: Tephritidae: Trypetinae). Zootaxa 2654: 1–16. (SCI: 0.891)
Xi YQ, Yin XM, Li XJ, Zhu CD, Zhang YZ. 2010. Scanning electron microscopy studies of antennal sensilla of Lysiphlebus fabarum (Marshall) (Hymenoptera: Braconidae). Acta Entomologica Sinica 53(8): 936-942.
Xi YQ, YZ Zhang*, CD Zhu, Yin XM. 2010. Astymachus and Bouchekiella (Hymenoptera: Encyrtidae) from China. Oriental Insects, 44:11-16. (SCI: 0.230)
Yu Fang, YZ Zhang, CD Zhu, Tu LH*. 2010. A taxonomic study of Chinese species of Cpidosomopsis Girault (Hymenoptera: Encyrtidae). Zootaxa, 2490:55-62. (SCI: 0.891)
武宇鵬,於芳,張彥周,朱朝東*,武春生. 果園三種天蛾的DNA條形碼鑒定。動物分類學報 35(4).
Xi YQ, Yin XM, Zhu CD, Emillio G, Zhang YZ. 2011. Scanning Electron Microscopy Studies of Antennal Sensilla of Ooencyrtus phongi (Hymenoptera: Encyrtidae). MICROSCOPY RESEARCH AND TECHNIQUE 00:000–000 (2011) (SCI: 1.85)
Jiang ZF, Huang DW, Zhu CD & Zhen WQ. 2006. New insights into the phylogeny of fig pollinators using Bayesian analyses. Molecular Phylogenetics and Evolution, 306-315. (SCI: 3.556)
Sha ZL, Zhu CD, Murphy RW, La Salle J, Huang DW. 2006.Mitochondrial phylogeography of a leafminer parasitoid, Diglyphus isaea (Hymenoptera: Eulophidae) in China. Biological Control. 38(3): 380-389. (SCI: 1.445)
Sha ZL, Zhu CD, Murphy RW, Huang DW. 2007. Probably more than one species in Diglyphus isaea (Hymenoptera: Eulophidae), an important biological control agent of agromyzid leaf-miners. J. Zool. Syst. Evol. Res. 52(8):128-135(SCI: 1.596)
羅阿蓉,周宏宇,史衛峰,張彥周,朱朝東*. 2007. BlastAlign在同源基因片段檢索中的應用. 動物分類學報. 32(4): 862-864.
Shi WF, Zhu CD*. 2007. Coding and applying gaps in phylogenetic analyses. Acta Zootaxonomica Sinica. 32(1): 1-5.
沙忠利,朱朝東,Robert W.Murphy,黃大衛*.2007.基於分子係統學的可疑瑟姬小蜂分類修訂及姬小蜂亞科盾縱溝的演化分析.昆蟲學報.50(1):57-66.
丁亮,張彥周,朱朝東*.2007.鋸鳳蝶類和絹蝶類(鱗翅目:鳳蝶科)分類地位及係譜關係初探.動物分類學報:32(2): 355-362.
Sha ZL, ZHU CD, RW Murphy, Huang DW. 2007. A revised taxonomy of Cirrospilus ambiguus based on molecular systematics with notes on notauli evolution in Eulophinae. 昆蟲學報. 50(1): 57-66.
李捷, 周文卿, 張彥周, 羅阿蓉, 孔維娜, 趙飛, 康育光, 朱朝東*. 2008. 28S rDNA 序列的姬小蜂科( 膜翅目, 小蜂總科) 分類. 動物分類學報, 33 (2) : 301 – 306
張彥周*, 於芳, 朱朝東. 2008. 基於28S rDNA D2基因序列的幾種寄生夜蛾科的多胚跳小蜂的分子係統發育. 昆蟲學報, 51(9): 992-996.
鄒方振, 郝家勝*, 黃敦元, 張大秀, 朱國萍, 朱朝東*. 2009. 基於線粒體ND1和16S基因序列探討中國蝴蝶科的係統發育關係. 昆蟲學報, 52(2):191-201.
A.B. Zhang*, L.J. He, R.H. Crozier, C. Muster, C.-D. Zhu*. 2010. Estimating sample sizes for DNA barcoding. Molecular Phylogenetics and Evolution. (2009), doi:10.1016/j.ympev.2009.09.014. (SCI: 3.556)
L.J. He?, A.B. Zhang, D. Weese, C.D Zhu, C.J. Jiang, Z.G. Qiao. 2010. Late Pleistocene population expansion of Scylla paramamosain along the coast of China: A population dynamic response to the Last Interglacial sea level highstand. Journal of Experimental Marine Biology and Ecology 385(1-2): 20-28. (SCI: 2.116)
Lijun He, Aibing Zhang, Chaodong Zhu, David Weese & Zhenguo Qiao. 2010. Phylogeography of the mud crab (Scylla serrata) in the Indo-West Pacific reappraised from mitochondrial molecular and oceanographic clues: transoceanic dispersal and coastal sequential colonization. Marine Ecology (2010) 1–13. (SCI: 1.558)
Arong Luo, Huijie Qiao, Yanzhou Zhang, Weifeng Shi, Simon YW Ho, Weijun Xu, Aibing Zhang and Chaodong Zhu*. 2010. Performance of criteria for selecting evolutionary models in phylogenetics: a comprehensive study based on simulated datasets. BMC Evolutionary Biology, 10:242. (SCI: 4.29)
毛增輝,郝家勝*,王晨,於芳,司曼曼,夏靖, 朱朝東*. 2010. 基於ITS-1基因的菜粉蝶地理種群遺傳分化研究. 昆蟲學報,53(10):1144-1152.
Luo AR, Zhang YZ, Qiao HJ, Shi WF, Murphy RW, Zhu CD*. 2010. Outgroup selection in tree reconstruction: a case study of the family Halictidae (Hymenoptera: Apoidea). 昆蟲學報,53(2):192-201.
武宇鵬,丁亮,李捷,武春生,範仁俊,朱朝東*. DNA條形碼的應用進展及討論。環境昆蟲學報 (接收)
毛增輝,郝家勝*,朱國萍,胡靜,司曼曼,朱朝東*. 2010. 菜粉蝶線粒體基因組的全序列測定和分析。昆蟲學報(接收:12月刊發)。
武宇鵬,於芳,張彥周,朱朝東*,武春生*.2010. 果園三種天蛾的DNA條形碼鑒定. 動物分類學報,35(4):827-834.
Arong Luo, Aibing Zhang, Simon Ho, Weijun Xu, Yanzhou Zhang, Weifeng Shi, Stephen L. Cameron, Chaodong Zhu*. Potential efficacy of mitochondrial genes for animal DNA barcoding. BMC Genomics 2010 (on-line) (SCI: 3.78).
A-b Zhang, C Muster, H-b Liang, C-d Zhu, R Crozier, P Wan, J Feng, and RD Ward. A Fuzzy Set Theory Based Approach to Analyze Species Membership in DNA Barcoding. Molecular Ecology (2nd revision) (SCI: 5.96)
Zhen WQ, Huang DW, Yang DR, & Zhu CD. 2004. Oviposition behavior of Apocrypta westwoodii. Entomological Knowledge 41(5): 446-448.
Zhen WQ, Huang DW, Yang DR, Xiao H. & Zhu CD. 2004. Oviposition behaviour of Philotrypesis pilosa Mayr (Hymenoptera: Agaonidae). Acta Entomologica Sinica 47(3): 365-371 (in Chinese).
Zhen WQ, Huang DW, Yang DR, Xiao H. & Zhu CD. 2004. Fig wasps associated with Ficus semicordata: oviposition timing and their population relationship. Acta Entomologica Sinica 47(6): 787-792 (in Chinese).
Zhen WQ, Huang DW, Xiao JH, Yang DR, Zhu CD & Xiao H. 2005. Ovipositor length of three Apocrypta species: effect on oviposition behavior and correlation with syconial thickness. Phytoparasitica. 33(2): 113-120. (SCI)
黃敦元,丁亮, 張彥周, 黃海榮, 朱朝東*.2007. 油茶地蜂(Andrena camellia Wu)巢穴生物學.昆蟲學報. 50(10): 1077-1082.
李捷,朱朝東*,王鳳鶴,黃敦元,張彥周,丁亮,黃海榮.2007. 野生蜜蜂及其傳粉作用的研究現狀. 生物多樣性.15(6): 687-692.
丁亮, 黃敦元, 張彥周, 黃海榮, 朱朝東*.2008. 盜寄生性蜜蜂-豔斑蜂(膜翅目:蜜蜂總科:Nomadinae)的生物學初探.昆蟲知識:45(4).
黃敦元,丁亮,張彥周,黃海榮,餘江帆,郝家勝,朱朝東*.2008.油茶地蜂生活史及相關生物學習性.昆蟲學報:778-783.
黃敦元,郝家勝,餘江帆,張彥周,丁亮,朱朝東*. 2009. 人類活動對經濟作物傳粉的影響. 經濟林研, 26(4):114-120.
黃敦元,郝家勝,餘江帆,張彥周,丁亮,朱朝東*. 2009. 油茶研究現狀與展望. 生命科學研究, 13(5):459-465.
黃敦元,餘江帆,郝家勝,張勤生,朱朝東*. 2010. 不同生境油茶林油茶史氏葉蜂的發生與危害程度比較. 中南林業科技大學學報, 30(1):59-64.
趙金良,張彥周,李捷,蔣國芳,朱朝東*. 2010. 有機果園食心蟲的綜合防治. 山西農業科學,38(5):39-43, 67.
趙延會,丁亮,袁峰,張彥周,圖立紅,朱朝東*. 2010. 大分舌蜂的營巢生物學. 昆蟲學報(接收).
羅阿蓉,張彥周,丁亮,朱朝東*.2007. 後基因組時代的蜜蜂QTL研究.昆蟲學報:50(9):950-956.
Shi WF, Yang NN, Chen D, Jin X, Zhang YZ, Zhu CD*. 2007. An X Genotype H5N1 Virus was Identified in Shandong in 2004.生命科學研究11(2): 177-182.
Shi WF, Zhang Z, Peng L, Zhang YZ, Liu B, Zhu CD*. 2007. Proteotyping: A New Approach Studying Influenza Virus Evolution at the Protein Level. Virologica Sinica. 22(5): 405-411.
Shi WF, Gibbs MJ, Zhang YZ, Zhang Z, Zhao XM, Jin X, Zhu CD*, Yang MF, Yang NN, CuiYJ, Ji L. 2008. Genetic Analysis of Four Porcine Avian Influenza Viruses Isolated from Shandong, China. Archives of Virology.153(1): 211-217.(SCI: 1.909)
Shi WF, Gibbs MJ, Zhang YZ, Zhang Z, Zhuang DM, Dun AS, Yu GF, Yang NN, Murphy RW, Zhu CD*. 2008. The variable codons of H5N1 avian influenza A virus haemagglutinin genes. 中國科學C. 51(11):1-7. (SCI)
Wei-feng SHI*, Zhong ZHANG, Ai-she DUN, Yan-zhou ZHANG, Guang-fu YU, Dong-ming ZHUANG and Chao-dong ZHU*. 2009. Positive Selection Analysis of VP1 Genes of Worldwide Human Enterovirus 71 Viruses. VIROLOGICA SINICA, February 2009, 24 (1):59-64.
Wei-feng SHI, Ai-she DUN, Zhong ZHANG, Yan-zhou ZHANG, Guang-fu YU, Dong-ming ZHUANG and Chao-dong ZHU*. 2009. Selection Pressure on Haemagglutinin Genes of H9N2 Influenza Viruses from Different Hosts. VIROLOGICA SINICA, February 2009, 24 (1):65-70.
Yan-yan Zhang, Wen-juan Xuan, Jin-liang Zhao, Chao-dong Zhu, Guo-fang Jiang*. 2009. The complete mitochondrial genome of the cockroach Eupolyphaga sinensis (Blattaria: Polyphagidae) and the phylogenetic relationships within the Dictyoptera. Mol Biol Rep DOI 10.1007/s11033-009-9944-1. (SCI: 2.02)
Jing Hu, Daxiu Zhang, Jiasheng Hao*, Dunyuan Huang, Stephen Cameron, Chaodong Zhu*. 2009. The complete mitochondrial genome of the yellow coaster, Acraea issoria (Lepidoptera: Nymphalidae: Heliconiinae: Acraeini): sequence, gene organization and a unique tRNA translocation event. Mol Biol Rep DOI 10.1007/s11033-009-9934-3. (SCI: 2.02)
史衛峰, 頓愛社 , 劉帥, 張彥周, 朱朝東*. 2009. 生物信息學在禽流感病毒研究中的應用. 中國病原生物學雜誌, 4(3): 219-223.
Jin-Liang Zhao, Yan-Yan Zhang, A-Rong Luo, Guo-Fang Jiang, Stephen L. Cameron, Chao-Dong Zhu﹡. 2010. The complete mitochondrial genome of Spilonota lechriaspis Meyrick (Lepidoptera: Tortricidae). Molecular Biology Reports (on-line) (SCI: 2.02)
Weifeng Shi*, Fumin Lei, Chaodong Zhu, Desmond G. Higgins. A complete analysis of HA and NA genes of influenza A viruses. PLOS one (on-line) (SCI: 4.351).
Minge Sun, Jiasheng Hao*, Guoping Zhu, Dunyuan Huang, Jinliang Zhao,Chaodong Zhu*. Complete mitogenomes of the two butterfly species Euploea mulciber (Nymphalidae: Danainae) and Libythea celtis (Nymphalidae: Libytheinae) and their phylogenetic significances. Molecular Biology Reports (accepted) (SCI: 2.02)
Fang Zhao, Jiasheng Hao*, Guoping Zhu, Jing Xia, Minge Sun, Liuwei Ji, Arong Luo, Chaodong Zhu*. The complete mitogenome of Abisara fylloides Linnaeus (Lepidoptera: Riodinidae) and its phylogenetic implications. Molecular Biology Reports (under review) (SCI: 2.02)
Liuwei Ji, Jiasheng Hao*, Ying Wang, Dunyuan Huang, Jinliang Zhao, Chao-Dong ZHU*. The complete mitochondrial genome of the dragon swallowtail, Sericinus montela Gray (Lepidoptera: Papilionidae ) and its phylogenetic implication. Molecular Biology Reports (accepted) (SCI: 2.02)
Wenfu Li, Weifeng Shi, Huijie Qiao, Simon Y.W. Ho, Arong Luo, Yanzhou Zhang, Chaodong Zhu*. Positive Selection on Hemagglutinin and Neuraminidase Genes of H1N1 Influenza Viruses. Virology Journal (submitted) (SCI: 2.44)